論文 - 花田 耕介
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Molecular Evolution and Functional Characterization of a Bifunctional Decarboxylase Involved in Lycopodium Alkaloid Biosynthesis. 査読有り
Bunsupa S, Hanada K, Maruyama A, Aoyagi K, Komatsu K, Ueno H, Yamashita M, Sasaki R, Oikawa A, Saito K, Yamazaki M.
Plant Physiolgy 171 ( 4 ) 2432 - 2444 2016年06月
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What plant trait explains the variations in relative growth rate and in its response to the elevated CO2 concentration among Arabidopsis thaliana ecotypes derived from a variety of habitats? 査読有り
Oguchi R, Ozaki H, Hanada K, Hikosaka K.
Oecologia 2016年05月
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Phytochrome controls alternative splicing to mediate light responses in Arabidopsis. 査読有り
Shikata H, Hanada K, Ushijima T, Nakashima M, Suzuki Y, Matsushita T
Proc Natl Acad Sci U S A. 2014年12月
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Transcriptomic analysis of rice in response to iron deficiency and excess. 査読有り
2. Bashir K, Hanada K, Shimizu M, Seki M, Nakanishi H and Nishizawa NK
Rice 2014年09月
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Substantial expression of novel small open reading frames in Oryza sativa.
3. Okamoto M, Higuchi-Takeuchi M, Shimizu M, Shinozaki K, Hanada K
Plant Signaling & Behavior 2014年02月
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25. ゲノム解析によるコムギABA受容体の同定および生化学的解析(口頭発表,植物化学調節学会第49回大会) 招待有り
妻鹿 良亮, 花田 耕介, 岡本 昌憲
植物化学調節学会 研究発表記録集 ( 一般社団法人 植物化学調節学会 ) 49 ( 0 ) 2014年01月
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Small open reading frames associated with morphogenesis are hidden in plant genomes. 査読有り
Hanada K, Higuchi-Takeuchi M, Okamoto M, Yoshizumi T, Shimizu M, Nakaminami K, Nishi R, Ohashi C, Iida K, Tanaka M, Horii Y, Kawashima M, Matsui K, Toyoda T, Shinozaki K, Seki M, Matsui M.
Proc Natl Acad Sci U S A. 110 2395 - 2400 2013年02月
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Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads. 査読有り
Kawaguchi S, Iida K, Harada E, Hanada K, Matsui A, Okamoto M, Shinozaki K, Seki M, and ToyodaT
Bioinformatics ( 28 ) 929 - 937 2012年04月
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Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana. 査読有り
8. Yonekura-Sakakibara K, Fukushima A, Nakabayashi R, Hanada K, Matsuda F, Sugawara S, Inoue E, Kuromori T, Ito T, Shinozaki K, Wangwattana B, Yamazaki M, Saito K
The Plant Journal 69 ( 1 ) 154 - 167 2012年01月
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Tissue-specific Transcriptome Analysis Reveals Cell Wall Metabolism, Flavonol Biosynthesis, and Defense Responses are Activated in the Endosperm of Germinating Arabidopsis thaliana Seeds. 査読有り
Endo A[e], Tatematsu K[e], Hanada K[e], Duermeyer L, Okamoto M, Yonekura-Sakakibara K, Saito K, Toyoda T, Kawakami N, Kamiya Y, Seki M, Nambara E*
Plant and Cell Physiology 2012年01月
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Origin and evolution of genes related to ABA metabolism and its signaling pathways. 査読有り
Hanada K*, Hase T, Toyoda T, Shinozaki K and Okamoto M
Journal of Plant Research 124 ( 4 ) 455 - 465 2011年07月
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An evolutionary view of functional diversity in family 1 glycosyltransferases. 査読有り
Yonekura-Sakakibara K* and Hanada K.
The Plant Journal 66 ( 1 ) 182 - 193 2011年04月
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ARTADE2DB: Improved Statistical Inferences for Arabidopsis Gene Functions and Structure Predictions by Dynamic-Structure-Based Dynamic Expression (DSDE) Analyses. 査読有り
10. Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T*
Cell Physiology 52 ( 2 ) 254 - 264 2011年02月
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Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources.
Hirai MY*, Sawada Y, Kanaya S, Kuromori T, Kobayashi M, Klausnitzer R, Hanada K, Akiyama K, Sakurai T, Saito K, Shinozaki K.
Journal of Plant Research 123 ( 3 ) 291 - 298 2010年05月
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sORF finder: a program package to identify small open reading frames(sORFs) with high coding potential. 査読有り
Hanada K*, Akiyama K, Sakurai T, Toyoda T, Shinozaki K, Shiu SH.
Bioinformatics 26 ( 3 ) 399 - 400 2010年02月
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Evolutionary Persistence of Functional Compensation by Duplicate Genes in Arabidopsis. 査読有り
Hanada K*, Kuromori T, Myouga F, Toyoda T, Li WH and Shinozaki K.
Genome Biology and Evolution 29 ( 1 ) 409 - 414 2009年10月
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PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants. 査読有り
17. Makita Y, Kobayashi N, Mochizuki Y, Yoshida Y, Asano S, Heida N, Deshpande M, Bhatia R, Matsushima A, Ishii M, Kawaguchi S, Iida K, Hanada K, Kuromori T, Seki M, Shinozaki K, Toyoda T*
Plant and Cell Physiology 50 ( 7 ) 1249 - 1259 2009年07月
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Evolutionary history and stress regulation of plant receptor-like kinase/pelle genes. 査読有り
Lehti-Shiu MD, Zou C, Hanada K, Shiu SH*.
Plant Physiology 150 ( 1 ) 12 - 26 2009年05月
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Increased expression and protein divergence inIncreased expression and protein divergence in duplicate genes is associated with morphological diversification. 査読有り
Hanada K*, Kuromori T, Myouga F, Toyoda T, Shinozaki K.
PLOS Genetics 5 ( 12 ) 2009年05月
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Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis. 査読有り
19. Kurihara Y, Matsui A, Hanada K, Kawashima M, Ishida J, Morosawa T, Tanaka M, Kaminuma E, Mochizuki Y, Matsushima A, Toyoda T, Shinozaki K, Seki M*
National Academy of Sciences of the United States of America 106 ( 7 ) 2453 - 2458 2009年02月