Papers - MAEDA Kazuhiro
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Wireframe DNA Origami Capable of Vertex-protruding Transformation Reviewed International journal
ChemBioChem 2025.02
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PredIL13: stacking a variety of machine and deep learning methods with ESM-2 language model for identifying IL13-inducing peptides Reviewed
Hiroyuki Kurata, Md. Harun-Or-Roshid, Sho Tsukiyama, Kazuhiro Maeda
PLOS ONE 2024.08
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MLm5C: A high-precision human RNA 5-methylcytosine sites predictor based on a combination of hybrid machine learning models Reviewed International journal
Methods 2024.05
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Elucidating key characteristics of PFAS binding to human peroxisome proliferator-activated receptor alpha: an explainable machine learning approach Reviewed International journal
Kazuhiro Maeda, Masashi Hirano, Taka Hayashi, Midori Iida, Hiroyuki Kurata, Hiroshi Ishibashi
Environmental Science & Technology 2023.12
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Stack-DHUpred: Advancing the accuracy of dihydrouridine modification sites detection via stacking approach Reviewed International journal
Md. Harun-Or-Roshid, Kazuhiro Maeda,Phan Thi Le, Balachandran Manavalan, Hiroyuki Kurata
Computers in Biology and Medicine 2023.12
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Automatic Generation of SBML Kinetic Models from Natural Language Texts using GPT Reviewed International journal
Kazuhiro Maeda, Hiroyuki Kurata
International Journal of Molecular Sciences 2023.04
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MLAGO: Machine learning-aided global optimization for Michaelis constant estimation of kinetic modeling Reviewed International journal
Kazuhiro Maeda, Aoi Hatae, Yukie Sakai, Fred C. Boogerd, Hiroyuki Kurata
BMC Bioinformatics 2022.11
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Simulation of the crosstalk between glucose- and acetaminophen metabolism in a liver zonation model "jointly worked" Reviewed International journal
Kazuhiro Maeda, Shuta Hagimori, Masahiro Sugimoto, Yasuyuki Sakai, Masaki Nishikawa
Frontiers in Pharmacology 2022.08
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RCGAToolbox: 動力学モデルのパラメーター推定 のための実数値遺伝的アルゴリズムソフトウェア
前田和勲,Fred C. Boogerd,倉田博之
IPSJ SIG Technical Report 2022.03
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RCGAToolbox: A real-coded genetic algorithm software for parameter estimation of kinetic models Reviewed
Kazuhiro Maeda, Fred C. Boogerd, Hiroyuki Kurata
IPSJ Transactions on Bioinformatics 2021.09
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Ranking network mechanisms by how they fit diverse experiments and deciding on E. coli's ammonium transport and assimilation network Reviewed
5 ( 1 ) 2019.12
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動力学パラメータ推定問題：大腸菌アンモニア輸送-同化ネットワークの事例
前田和勲
IPSJ SIG Technical Report 2019.09
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libRCGA: 動力学モデルの高速なパラメータ推定のための遺伝的アルゴリズムライブラリ
前田和勲, Fred C. Boogerd, 倉田博之
IPSJ SIG Technical Report 2018.09
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Long negative feedback loop enhances period tunability of biological oscillators Reviewed
440 21 - 31 2018.03
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libRCGA: a C library for real-coded genetic algorithms for rapid parameter estimation of kinetic models Reviewed
11 ( 0 ) 31 - 40 2018.01
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Web application for genetic modification flux with database to estimate metabolic fluxes of genetic mutants Reviewed
122 ( 1 ) 111 - 116 2016.07
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Development of an accurate kinetic model for the central carbon metabolism of Escherichia coli Reviewed
15 ( 1 ) 2016.06
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Analytical study of robustness of a negative feedback oscillator by multiparameter sensitivity Reviewed
8 ( 5 ) 2014.12
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Dynamic modeling of metabolic and gene regulatory systems toward developing virtual microbes Reviewed
47 ( 1 ) 1 - 9 2014.01
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CADLIVE toolbox for MATLAB: Automatic dynamic modeling of biochemical networks with comprehensive system analysis Reviewed
37 ( 9 ) 1925 - 1927 2014.01